jade.RAbD.window_main package

jade.RAbD.window_main.AnalysisFrame module

class jade.RAbD.window_main.AnalysisFrame.AnalysisFrame(main, compare_designs, main_gui, **options)

Bases: Tkinter.Frame

check_set_pyigclassify()

copy_to_dir()

copy_to_dir_and_rename()

get_decoys()

Split the decoys by return type - so you can do multiple things to the decoys :rtype: list of str

open_msa()

open_seq_logo()

print_decoy_info()

print_enrichments()

print_fasta()

print_recovery()

set_tk()

sho_tk()

jade.RAbD.window_main.CompareStrategiesFrame module

class jade.RAbD.window_main.CompareStrategiesFrame.CompareStrategiesFrame(main, compare_designs, main_gui, **options)

Bases: Tkinter.Frame

add_main_strategy()

add_to_current(from_listbox, to_listbox)

delete_current(listbox)

get_full_strategy_list()

populate_all_strategies()

set_tk()

sho_tk()

show_strat_items()

jade.RAbD.window_main.FeaturesFrame module

class jade.RAbD.window_main.FeaturesFrame.FeaturesFrame(main, compare_designs, main_gui, **options)

Bases: Tkinter.Frame

run_features_reporter(type)

set_tk()

sho_tk()

jade.RAbD.window_main.menu module

class jade.RAbD.window_main.menu.AntibodyDesignAnalysisMenu(main, compare_designs, main_gui)

Bases: object

camelid_tracer(name, index, mode)

change_root()

create_subset_databases(score_name)

get_full_strategy_list()

open_sequence_logo()

print_threads()

read_from_db_dir_set_strategies()

run_clustal_omega()

run_clustal_on_all_combined()

run_copy_all()

set_clustal_output_format()

set_clustal_soft_wrap()

set_max_clustal_procs()

set_native_path()

set_pyigclassify_dir()

set_reference_db()

set_tk()

set_top_n()

set_top_n_combined()

sho_tk()